Aditya jain Experience

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Databases:- Nucleotide database          1. DDBJ (DNA Data Bank of Japan)            2. EMBL Nucleotide DB (European Molecular Biology Laboratory)            3. GenBank  (National Center for Biotechnology Information) Protein sequence databases               1. UniProt ( Universal Protein Resource (UniProt Consortium: EBI, Expasy, PIR)            2. PIR  Protein Information Resource (Georgetown University Medical Center (GUMC)            3. Swiss-Prot ( Protein Knowledgebase (Swiss Institute of Bioinformatics)            4. PEDANT Protein Extraction, Description and ANalysis Tool          ...
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Template search, fold assignment:- PDB-Blast BLAST FastA DALI PhD, TOPITS THREADER 123D UCLA-DOE PROFIT MATCHMAKER 3D-PSSM BIOINGBGU FUGUE LOOPP FASS SAM-T99/T98
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8 Publications by Aditya Jain

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Collapse publications sect Edit publication 1-CMDb: A Curated Database of Genomic Variations of the One-Carbon Metabolism Pathway publication title 1-CMDb: A Curated Database of Genomic Variations of the One-Carbon Metabolism Pathway publication date May 17, 2017    publication description Public Health Genome publication description The one-carbon metabolism pathway is vital in maintaining tissue homeostasis by driving the critical reactions of folate and methionine cycles. A myriad of genetic and epigenetic events mark the rate of reactions in a tissue-specific manner. Integration of these to predict and provide personalized health management requires robust computational tools that can process multiomics data. The DNA sequences that may determine the chain of biological events and the endpoint reactions within one-carbon metabolism genes remain to be comprehensively recorded. Hence, we designed the one-carbon metabolism database (1-CMDb) as a platform to interro...
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