Databases:- Nucleotide database 1. DDBJ (DNA Data Bank of Japan) 2. EMBL Nucleotide DB (European Molecular Biology Laboratory) 3. GenBank (National Center for Biotechnology Information) Protein sequence databases 1. UniProt ( Universal Protein Resource (UniProt Consortium: EBI, Expasy, PIR) 2. PIR Protein Information Resource (Georgetown University Medical Center (GUMC) 3. Swiss-Prot ( Protein Knowledgebase (Swiss Institute of Bioinformatics) 4. PEDANT Protein Extraction, Description and ANalysis Tool ...
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TOOLS FOR HOMOLOGY MODELING (COMPARATIVE MODELING) Program Website address Program description Geno3d http://pbil.ibcp.fr/ Automatic modeling of protein three-dimensional structure Swiss Model http://www.expasy.org/swissmod/SWISS-MODEL.html An automated knowledge-based protein modeling server; first approach and optimise CPHmodels Http://www.cbs.dtu.dk/services/CPHmodels/ Automated neural-network based protein modeling server Modeller http://salilab.org/ A program for automated protein Homology Modeling Amber http://amber.scripps.edu/ Similar package as CHARMm. Developed by Kollaman's group at UCSF Homology http://www.accelrys.com/ Automatic Homology Modeling module. The software suite also has Modeller, SeqFold modules, Quanta Wloop http://psb00.snv.jussieu.fr/wloop/ The Loop Homology Modeling Server What-If...
MOTIF SEARCH AND DOMAIN SEARCH TOOLS:-
3DEE CDTREE GLOBPLOT2 PROSITE MEMERIS RNAMST CMFINDER COMRNA 3DINSIGHT
E-BOOKS :- PERL BIOPERL MOLECULAR GENETICS BIOINFORMATIC SEQUENCE AND GENOME ANALYSIS PROTEIN STRUCTURE KUBY-IMMUNOLOGY PROTEIN STRUCTURE AND FUNCTION ABC OF CLINICAL GENETICS BIOINFORMATIC PROTEOMICS IN PRACTISE PROTEIN STRUCTURE PREDICTION ESSENTIAL BIOINFORMATIC Lesk A.M. Introduction to bioinformatics (Oxford, 2002)(255s). intelligent-bioinformatics-the-application-of-artificial-intelligence.pdf drug_design_based_on_bioinformatics_too.pdf Developing Bioinformatics Computer Skills.pdf Cold Spring Harbor Laboratory Press - Bioinformatics. Sequence and Genome Analysis.pdf Bioinformatics for Dummies - 2007.pdf Bioinformatics - Computational Molecular Biology.pdf Bioinformatics - Computational Genetics - Wiley1.pdf Baxevanis A.D., Ouelette B.F.F. Bioinformatics.. a practical guide to the analysis of genes and p.pdf ...