ADITYA JAIN

TOOLS FOR HOMOLOGY MODELING (COMPARATIVE MODELING) Program Website address Program description Geno3d http://pbil.ibcp.fr/ Automatic modeling of protein three-dimensional structure Swiss Model http://www.expasy.org/swissmod/SWISS-MODEL.html An automated knowledge-based protein modeling server; first approach and optimise CPHmodels Http://www.cbs.dtu.dk/services/CPHmodels/ Automated neural-network based protein modeling server Modeller http://salilab.org/ A program for automated protein Homology Modeling Amber http://amber.scripps.edu/ Similar package as CHARMm. Developed by Kollaman's group at UCSF Homology http://www.accelrys.com/ Automatic Homology Modeling module. The software suite also has Modeller, SeqFold modules, Quanta Wloop http://psb00.snv.jussieu.fr/wloop/ The Loop Homology Modeling Server What-If

3DEE CDTREE GLOBPLOT2 PROSITE MEMERIS RNAMST CMFINDER COMRNA 3DINSIGHT

E-BOOKS :- PERL BIOPERL MOLECULAR GENETICS BIOINFORMATIC SEQUENCE AND GENOME ANALYSIS PROTEIN STRUCTURE KUBY-IMMUNOLOGY   PROTEIN STRUCTURE AND FUNCTION   ABC OF CLINICAL GENETICS BIOINFORMATIC PROTEOMICS IN PRACTISE PROTEIN STRUCTURE PREDICTION ESSENTIAL BIOINFORMATIC Lesk A.M. Introduction to bioinformatics (Oxford, 2002)(255s).   intelligent-bioinformatics-the-application-of-artificial-intelligence.pdf drug_design_based_on_bioinformatics_too.pdf   Developing Bioinformatics Computer Skills.pdf     Cold Spring Harbor Laboratory Press - Bioinformatics. Sequence and Genome Analysis.pdf     Bioinformatics for Dummies - 2007.pdf         Bioinformatics - Computational Molecular Biology.pdf   Bioinformatics - Computational Genetics - Wiley1.pdf   Baxevanis A.D., Ouelette B.F.F. Bioinformatics.. a practical guide to the analysis of genes and p.pdf    

Template search, fold assignment:- PDB-Blast BLAST FastA DALI PhD, TOPITS THREADER 123D UCLA-DOE PROFIT MATCHMAKER 3D-PSSM BIOINGBGU FUGUE LOOPP FASS SAM-T99/T98